
{"id":2201,"date":"2023-06-22T08:48:26","date_gmt":"2023-06-22T08:48:26","guid":{"rendered":"https:\/\/nus.edu.sg\/lsi\/?page_id=2201"},"modified":"2023-06-23T03:45:12","modified_gmt":"2023-06-23T03:45:12","slug":"nus-cambridge-immune-phenotyping-centre","status":"publish","type":"page","link":"https:\/\/www.nus.edu.sg\/lsi\/nus-cambridge-immune-phenotyping-centre\/","title":{"rendered":"NUS-Cambridge Immune Phenotyping Centre"},"content":{"rendered":"<p><img decoding=\"async\" class=\"caption\" title=\"From left to right: Isabelle Tan, Dr Paul Hutchinson, Dr Karishma Sachaphibulkij, Rashi Gupta. \" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/nuscipc.jpg\" alt=\"\" width=\"100%\" \/><\/p>\n<p><strong>About NUS-Cambridge Immune Phenotyping Centre (NCIPC)<\/strong><\/p>\n<p>The centre was established in July 2022 and is led by Associate Professor Paul A. MacAry, Director of Life Sciences Institute (LSI), at the National University of Singapore (NUS) and Professor Ken Smith, Director of Cambridge Institute for Therapeutic Immunology and Infectious Disease (CITIID), at the University of Cambridge. NCIPC is an advanced, comprehensive immune, metabolic and microbial phenotyping platform that exploits advances in high-dimensional flow cytometry, massive parallel sequencing, microbiome metagenomics, proteomics, and single-cell transcriptomics to map cellular and molecular pathways in human health and disease and in patients with a range of diseases and subject to various therapeutic interventions.<\/p>\n<p>The platform at NUS is a mirror-image to the Cambridge BRC Cell Phenotyping Hub at the University of Cambridge. Both sites have identical equipments, methods and workflows, in order to simultaneously run and generate standardised data that can be directly comparable to cohort studies at both sites. The centre serves as a focal point for research collaborations between basic and clinician scientists and industries aiming to investigate Asian and Caucasian phenotypes within Singapore and Cambridge. The centre is managed by Dr Karishma Sachaphibulkij and a scientific team of experts.<\/p>\n<p><strong>Vision<\/strong><\/p>\n<ul>\n<li>To provide state of the art high quality, cost-effective technological expertise and services across the wide range of cytomics and deep immune phenotyping in healthy controls and in patients with a range of diseases and subject to various therapeutic interventions<\/li>\n<li>To generate standardized data that can be directly comparable to the European cohort in Cambridge BRC Cell Phenotyping Hub.<\/li>\n<li>To serve as a focal point for research collaborations between basic and clinician scientists within Singapore and from Cambridge.<\/li>\n<\/ul>\n<p>The platform is equipped with state-of-the-art analysers and cell sorters and are listed below:<\/p>\n<h3>Booking of machines <\/h3>\n<p>Approval from the NCIPC lab is first needed before you can register to make bookings on the analysers. You can consult the calendars for when time is available on the cell sorters but always contact the lab members directly before making a booking.<\/p>\n<h3>Lab operating hours <\/h3>\n<p>Monday to Friday: 9am to 6:30pm, excluding public holidays. <\/p>\n<p>After hours: Upon approval from Dr Karishma. <\/p>\n<p><strong>Usage charges<\/strong><\/p>\n<p>Please contact us directly for machine usage charges.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-386 size-full\" style=\"float: left; margin-right: 15px; max-width: 150px;\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/Karishma.jpg\" alt=\"\" width=\"150\" height=\"199\" \/>Contact person: <strong>Dr Karishma Sachaphibulkij<\/strong><br \/>\nPhD<br \/>\nManager, Research Fellow<br \/>\nNUS-Cambridge Immune Phenotyping Centre, 28 Medical Drive,<br \/>\nCentre for Life Sciences, #03-05B<br \/>\nSingapore 117456<br \/>\nEmail: <a href=\"mailto:karishma@nus.edu.sg\"><strong>karishma@nus.edu.sg<\/strong><\/a><\/p>\n<p>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-386 size-full\" style=\"float: left; margin-right: 15px; max-width: 150px;\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/Anita.jpg\" alt=\"\" width=\"150\" height=\"99\" \/>Contact person: <strong>Anita Balakrishnan<\/strong><br \/>\nAdministrative Manager<br \/>\nNUS-Cambridge Immune Phenotyping Centre, 28 Medical Drive,<br \/>\nCentre for Life Sciences, #03-05<br \/>\nSingapore 117456<br \/>\nEmail: <a href=\"mailto:anita@nus.edu.sg\"><strong>anita@nus.edu.sg<\/strong><\/a><\/p>\n<p>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<\/p>\n<p><strong>Equipments<\/strong><\/p>\n<p>The platform is equipped with state-of-the-art analysers and cell sorters and are listed below:<\/p>\n<p><strong>ANALYSERS<\/strong><\/p>\n<div id=\"1\">\n<h3><strong>BD FACSymphony\u2122 Flow Cytometer<\/strong><\/h3>\n<div style=\"width: 300px; float: left;\"><img decoding=\"async\" align=\"left\/\" class=\"size-full wp-image-413 alignleft\" style=\"max-width: 261px;\" alt=\"\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/bdfacs.jpg\"><\/div>\n<div style=\"vertical-align: middle; float: left;\">\n<p>A flow cytometer that leverages the inherent benefits of flow cytometry and enables the simultaneous measurement of up to 30 different characteristics of a single cell.<br \/>\nTechnical capability in analysis: up to 5 lasers: 355nm, 405nm, 488nm, 561nm, &#038; 635nm <\/p>\n<\/div>\n<\/div>\n<div style=\"clear: both;\"><\/div>\n<hr>\n<div id=\"2\">\n<h3><strong>Mabtech IRIS 2 ELISpot\/FluoroSpot reader<\/strong><\/h3>\n<div style=\"width: 300px; float: left;\"><img decoding=\"async\" align=\"left\/\" class=\"size-full wp-image-413 alignleft\" style=\"max-width: 261px;\" alt=\"\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/mabtech.jpg\"><\/div>\n<div style=\"vertical-align: middle; float: left;\">\n<p>The ELISpot and FluoroSpot assays capture analyte immediately after secretion and throughout the stimulation process<br \/>\nTechnical information:<br \/>\nElispot: 1 colour<br \/>\nFluorospot: 4 colours<br \/>\n380 nm\/430 nm (DAPI equivalent)<br \/>\n490 nm\/510 nm (FITC equivalent)<br \/>\n550 nm\/570 nm (Cy3 equivalent)<br \/>\n640 nm\/660 nm (Cy5 equivalent)<br \/>\nFociSpot: 1 colour\n<\/p><\/div>\n<\/div>\n<div style=\"clear: both;\"><\/div>\n<hr>\n<div id=\"3\">\n<h3><strong>2100 Bioanalyzer Instrument<\/strong><\/h3>\n<div style=\"width: 300px; float: left;\"><img decoding=\"async\" align=\"left\/\" class=\"size-full wp-image-413 alignleft\" style=\"max-width: 261px;\" alt=\"\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/bioanalyzer.png\"><\/div>\n<div style=\"vertical-align: middle; float: left;\">\n<p>The 2100 Bioanalyzer instrument, together with the 2100 Expert Software and Bioanalyzer assays, provide highly precise analytical evaluation of various sample types in many workflows, including next generation sequencing (NGS), gene expression, biopharmaceutical, and gene editing research.  <\/p>\n<\/div>\n<\/div>\n<div style=\"clear: both;\"><\/div>\n<hr>\n<div id=\"4\">\n<h3><strong>Seahorse XFe96 Analyzer<\/strong><\/h3>\n<div style=\"width: 300px; float: left;\"><img decoding=\"async\" align=\"left\/\" class=\"size-full wp-image-413 alignleft\" style=\"max-width: 261px;\" alt=\"\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/xfe96.png\"><\/div>\n<div style=\"vertical-align: middle; float: left;\">\n<p>The Seahorse XFe96 Analyzer measure OCR and ECAR of live cells in a 96-well plate format. OCR and ECAR rates are key indicators of mitochondrial respiration and glycolysis, and these measurements provide a systems-level view of cellular metabolic function in cultured cells and ex-vivo samples. The Seahorse Analyzer provides non-invasive measurement with no addition of dyes, labels or reporters. It measures adherent cells without requiring trypsinization, and suspension cells may be measured using Cell-Tak\u00ae cell and tissue attachment medium. It typically requires only 5\u00d7103 to 5\u00d7105 per 96-well Seahorse assay.\n<\/p><\/div>\n<\/div>\n<div style=\"clear: both;\"><\/div>\n<hr>\n<div id=\"5\">\n<h3><strong>Luminex\u00ae 200\u2122<\/strong><\/h3>\n<div style=\"width: 300px; float: left;\"><img decoding=\"async\" align=\"left\/\" class=\"size-full wp-image-413 alignleft\" style=\"max-width: 261px;\" alt=\"\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/luminex.png\"><\/div>\n<div style=\"vertical-align: middle; float: left;\">\n<p>The Luminex\u00ae 100\/200\u2122 System is a flexible analyser based on the principles of flow cytometry that enables you to multiplex (simultaneously measure) up to 100 analytes in a single microplate well, using very small samples. The system delivers fast an d cost-effective bioassay results on many assay formats including nucleic acid assays, receptor-ligand assays, immunoassays, and enzymatic assays. The analyser allows for multiplexing up to 100 analytes per sample.<\/p>\n<\/div>\n<\/div>\n<div style=\"clear: both;\"><\/div>\n<hr>\n<div id=\"5\">\n<strong>CELL SORTERS<\/strong><\/p>\n<h3><strong>autoMACS\u00ae Pro Separator<\/strong><\/h3>\n<div style=\"width: 300px; float: left;\"><img decoding=\"async\" align=\"left\/\" class=\"size-full wp-image-413 alignleft\" style=\"max-width: 261px;\" alt=\"\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/automacs.jpg\"><\/div>\n<div style=\"vertical-align: middle; float: left;\">\n<p>Any positive and untouched isolation can be performed to separate target cells from PBMCs, cultured cells, and dissociated tissue. In addition, cells can be directly isolated from whole blood or bone marrow using StraightFrom\u00ae Whole Blood MicroBeads. Overall, more than 400 different MicroBeads and Isolation Kits are available. Upon automated separation, labeled cells as well as non-labeled cells are obtained and can be used for a variety of downstream applications such as functional and molecular assays, chimerism analysis, and flow cytometry. To ensure cell viability and integrity, cells are kept cooled in Chill Racks.<\/p>\n<\/div>\n<\/div>\n<div style=\"clear: both;\"><\/div>\n<hr>\n<div id=\"5\">\n<h3><strong>BD FACSAria\u2122 Fusion Flow Cytometer<\/strong><\/h3>\n<div style=\"width: 300px; float: left;\"><img decoding=\"async\" align=\"left\/\" class=\"size-full wp-image-413 alignleft\" style=\"max-width: 261px;\" alt=\"\" src=\"https:\/\/www.nus.edu.sg\/lsi\/wp-content\/themes\/nus\/data1\/images\/aria.png\"><\/div>\n<div style=\"vertical-align: middle; float: left;\">\n<p>The BD FACSAria\u2122 Fusion Flow Cytometer combines sorting capabilities with best-in-class biosafety expertise for a comprehensive advanced cell sorter and biosafety solution.<br \/>\nTechnical capabilities: (355nm, 405nm, 488nm, 561nm, &#038; 635nm Lasers, 18 Fluorescence Parameters). <\/p>\n<\/div>\n<\/div>\n<div style=\"clear: both;\"><\/div>\n","protected":false},"excerpt":{"rendered":"<p>About NUS-Cambridge Immune Phenotyping Centre (NCIPC) The centre was established in July 2022 and is led by Associate Professor Paul A. MacAry, Director of Life Sciences Institute (LSI), at the National University of Singapore (NUS) and Professor Ken Smith, Director of Cambridge Institute for Therapeutic Immunology and Infectious Disease (CITIID), at the University of Cambridge.<a class=\"read-more\" href=\"https:\/\/www.nus.edu.sg\/lsi\/nus-cambridge-immune-phenotyping-centre\/\">Read More<\/a><\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"custompagewithmenu.php","meta":{"footnotes":""},"tags":[67],"class_list":["post-2201","page","type-page","status-publish","hentry","tag-mm-nuscipc"],"_links":{"self":[{"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/pages\/2201"}],"collection":[{"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/comments?post=2201"}],"version-history":[{"count":11,"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/pages\/2201\/revisions"}],"predecessor-version":[{"id":2238,"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/pages\/2201\/revisions\/2238"}],"wp:attachment":[{"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/media?parent=2201"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.nus.edu.sg\/lsi\/wp-json\/wp\/v2\/tags?post=2201"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}